User Guide #1: Find and Download Data, Metadata, and Annotations | Scribe

    User Guide #1: Find and Download Data, Metadata, and Annotations

    • Milan Vu |
    • 10 steps |
    • 5 minutes
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    This study involves human data classified as controlled access, requiring a Data Use Certificate. Ensure you understand this study's [data access requirements](https://eliteportal.synapse.org/Explore/Studies/DetailsPage/StudyData?studyKey=ADAMTS7#AccessRequirements). Use a secure environment, such as a cloud computing instance, for downloading this data instead of a local computer.

    Log in to the Portal

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    Sign in with your Synapse account

    Search for Study Files

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    **Search for Study Files** Navigate to the **Explore** tab and select the **Data** subtab
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    **Search for Study Files** Use the **Filters** panel to locate ADAMTS7 data: - Under the **Study** filter, select “ADAMTS7” - Under the **Data Type** filter, select "geneExpression"
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    **Add Files to the Download Cart** - Click the **Download Options** icon above the data table. - Select **Add to Download Cart** from the dropdown. - Confirm the selection in the notification that appears.

    Download Files

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    **Download Files from Download Cart** - Click on the **shopping cart icon** (top-right corner). - Review the list and select **Download As .Zip Packages** for eligible files. - Name your package and proceed with the download. *Note*: You must complete any access requirements before downloading data. Check the **Access Actions** tab for details.
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    *Note*: There is a limit on the number and size of files that can be downloaded through the web. For bulk downloads exceeding web limits, refer to [**User Guide #2: Download Files Programmatically**](https://sagebionetworks.jira.com/wiki/spaces/EPD/pages/2838856252/User+Guide+2+Download+Files+in+Bulk+with+Command+Line)

    Download File Annotations

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    **Downloading File Annotations** - Return to the filtered **Explore** page. - Click the **download icon** again, then select **Export Table**. - Customize file format and contents, then click **Next** to download the annotation file.

    Download Metadata Files

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    **Download Metadata Files** - Navigate to the **Explore** tab then **Studies** subtab - Search for the ADAMTS7 study
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    **Download Metadata Files** - Click on the study name
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    **Download Metadata Files** - Navigate to the **Study Data** tab
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    **Download Metadata Files** Use either the **Download Cart** or **Programmatic Options** to download the metadata files.
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    For combining metadata with study data, see [**User Guide #3: Joining Metadata with Data**](https://sagebionetworks.jira.com/wiki/spaces/EPD/pages/2838856303/User+Guide+3+Joining+Metadata+with+Data).