Use the filters to get the your desired data

(Optional) Show the "Data File Key" column

Open the downloaded CSV in excel or editor of choice.

Copy cells / text with links to add to Cavatica.

Navigate to your Cavatica project

Home page for Cavatica: <https://cavatica.sbgenomics.com/>

Click "FTP / HTTP" to add the files from Synapse

Tip! Multiple links need to be separated by a new line. If uploading from a file, make sure only the links are in the file. The downloaded table from the ELITE portal contains extra columns. Delete those and the header before uploading the CSV. 

Import from an FTP or HTTP(S) server 
Paste the link of the file(s) you want to import
or Browse file
 on your computer containing the links

That's it! 

The files will begin to appear in your Cavatica project. Refresh the page if you do not see the files appear automatically. 

Cavatica

Send indexed (externally hosted) data from the ELITE Portal to CAVATICA using FTP links.

More instructions can be found on Cavatica here: https://docs.cavatica.org/docs/upload-from-an-ftp-server

User Guide #5.1: Send Files to CAVATICA using FTP links

Getting FTP links from the ELITE portal

Add Files to Cavatica Project